Please be aware that Tokyo has multiple airports and that these results are for all airports serving the city.
The best month to fly between Tokyo and Manila is May and the most expensive month to fly is April. (Average prices, based on 413 datapoints.)
The best day to arrive at Tokyo is Sunday and it would be best to avoid Wednesday, as prices are on average 76.4% higher than on Sunday. (Average prices, based on 413 datapoints.)
The cheapest airline flying from Tokyo to Manila is Philippines AirAsia. They are 82% cheaper than All Nippon Airways. (Average prices, based on 425 datapoints.)
The best time to fly is at around 8. (Average prices, based on 817 datapoints.)